Publications

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Thesis
Church, B. (2018).  Scoliosis visualization using ultrasound data. School of Computing. MSc, PDF icon Church_Benjamin_D_201804_MSc.pdf (4.12 MB)
Patent
Fichtinger, G., Jain A., Mustufa T., Wyrobek K., Chirikjian G., Zhou Y., et al. (2003).  Image Registration of multiple medical imaging modalities using a multiple degree-of-freedom-encoded fiducial.
Journal Article
Balogh, E., Deguet A., Susil R., Krieger A., Viswanathan A., Menard C., et al. (2004).  Visualization, Planning, and Monitoring Software for MRI-Guided Prostate Intervention Robot. Proceedings Lecture Notes in Computer Science Medical Image Computing and Computer-Assisted Intervention (MICCAI). 3217, 73-80.PDF icon Balogh2004.pdf (707.08 KB)
Fischer, G., Dyer E., Csoma C., Deguet A., & Fichtinger G. (2007).  Validation system of MR image overlay and other needle insertion techniques. Studies in health technology and informatics. 125, 130–135.PDF icon Fischer2007a.pdf (404.46 KB)
Lobo, J. R., Moradi M., Chng N., Dehghan E., Morris W. J., Fichtinger G., et al. (2012).  Use of Needle Track Detection to Quantify the Displacement of Stranded Seeds Following Prostate Brachytherapy. IEEE Transactions on Medical Imaging. 31, 738 - 748.
Fooladgar, F., Jamzad A., Connolly L., Santilli A., Kaufmann M., Ren K., et al. (2022).  Uncertainty estimation for margin detection in cancer surgery using mass spectrometry. International Journal of Computer Assisted Radiology and Surgery.
Boctor, E., de Oliveira M., Choti M., Ghanem R., Taylor R., Hager G. D., et al. (2006).  Ultrasound monitoring of tissue ablation via deformation model and shape priors. Medical image computing and computer-assisted intervention (MICCAI). 9, 405–412.PDF icon Boctor2006b.pdf (6.61 MB)
Kettenbach, J., Kronreif G., Melzer A., Fichtinger G., Stoianovici D., & Cleary K. (2008).  Ultrasound-, CT-, MR-Guided Robot-Assisted Interventions. Image Processing in Radiology. 3, 393-409.
Susil, R., Menard C., Krieger A., Coleman J., Camphausen K., Choyke P., et al. (2006).  Transrectal prostate biopsy and fiducial marker placement in a standard 1 5T magnetic resonance imaging scanner. The Journal of Urology. 175, 113–120.PDF icon Susil2006.pdf (942.99 KB)
Susil, R., Menard C., Krieger A., Coleman J., Camphausen K., Choyke P., et al. (2006).  Transrectal prostate biopsy and fiducial marker placement in a standard 1 5T magnetic resonance imaging scanner. The Journal of Urology. 175, 113–120.PDF icon Susil2006.pdf (942.99 KB)
Susil, R., Menard C., Krieger A., Coleman J., Camphausen K., Choyke P., et al. (2006).  Transrectal prostate biopsy and fiducial marker placement in a standard 1 5T magnetic resonance imaging scanner. The Journal of Urology. 175, 113–120.PDF icon Susil2006.pdf (942.99 KB)
Susil, R., Menard C., Krieger A., Coleman J., Camphausen K., Choyke P., et al. (2006).  Transrectal prostate biopsy and fiducial marker placement in a standard 1 5T magnetic resonance imaging scanner. The Journal of Urology. 175, 113–120.PDF icon Susil2006.pdf (942.99 KB)
Jain, A. K., Zhou Y., Kennedy C., Mustufa T., E. Burdette C., Chirikjian G., et al. (2005).  Towards Intra-Operative Dosimetry in Prostate Brachytherapy. Journal of Medical Physics. 32, 2159-2159.PDF icon Jain2005c.pdf (4.07 MB)
Hisey, R., Camire D., Erb J., Howes D., Fichtinger G., & Ungi T. (2021).  System for central venous catheterization training using computer vision-based workflow feedback. IEEE Transactions on Biomedical Engineering.
Tokuda, J., Fischer G., Csoma C., DiMaio S., Gobbi D., Fichtinger G., et al. (2008).  Software strategy for robotic transperineal prostate therapy in closed-bore MRI. Medical image computing and computer-assisted intervention (MICCAI). 11, 701–709.PDF icon Tokuda2008.pdf (3.22 MB)
Pinter, C., Lasso A., Choueib S., Asselin M., Fillion-Robin J-C., Vimort J-B., et al. (2020).  SlicerVR for Medical Intervention Training and Planning in Immersive Virtual Reality. IEEE Transactions on Medical Robotics and Bionics. 2, 108-117.PDF icon Pinter2020.pdf (521.6 KB)
Singh, A. K., Guion P., Sears-Crouse N., Ullman K., Smith S., Albert P., et al. (2007).  Simultaneous integrated boost of biopsy proven and MRI defined dominant intra-prostatic lesions to 95 Gray with IMRT: early results of a phase I NCI study. Radiation Oncology. 2, 36.PDF icon Singh2007b.pdf (482.13 KB)
Chang, J., Wen B., Kazanzides P., Zanzonico P., Finn R. D., Fichtinger G., et al. (2009).  A robotic system for [sup 18]F-FMISO PET-guided intratumoral pO[sub 2] measurements. Medical Physics. 36, 5301-5309.PDF icon Chang2009.pdf (717.56 KB)
Seifabadi, R., Song S. Sang- Eun, Krieger A., Cho N. Bongjoon, Tokuda J., Fichtinger G., et al. (2011).  Robotic System for MRI-guided Prostate Biopsy: Feasibility of Teleoperated Needle Insertion and ex vivo Phantom Study. International Journal of Computer Aided Radiology and Surgery (IJCARS). PDF icon Seifabadi2011a.pdf (830.16 KB)
Boctor, E., Fichtinger G., Yeung A., Awad M., Taylor R., & Choti M. (2004).  Robotic Strain Imaging for Monitoring Thermal Ablation of Liver Tumors. Proceedings in Lecture Notes in Computer Science. 3217, 81-88.PDF icon Boctor2004b.pdf (1.19 MB)
DiMaio, S., Pieper S., Chinzei K., Hata N., Balogh E., Fichtinger G., et al. (2006).  Robot-assisted needle placement in open-MRI: system architecture, integration and validation. Studies in health technology and informatics. 119, 126–131.PDF icon DiMaio2006b.pdf (495.47 KB)
DiMaio, S., Pieper S., Chinzei K., Hata N., Haker S., Kacher D., et al. (2007).  Robot-assisted needle placement in open MRI: system architecture, integration and validation. Journal of Computer Aided Surgery. 12, 15–24.PDF icon DiMaio2007a.pdf (372.98 KB)
Fedorov, A., Beichel R., Kalpathy-Cramer J., Clunie D., Onken M., Riesmeier J., et al. (2020).  Quantitative Imaging Informatics for Cancer Research. JCO Clinical Cancer Informatics. 4, 444-453..PDF icon Fedorov2020.pdf (840.27 KB)
Chowning, S., Susil R., Krieger A., Fichtinger G., Whitcomb L. L., & Atalar E. (2006).  A preliminary analysis and model of prostate injection distributions. The Prostate. 66, 344–357.PDF icon Chowning2006.pdf (683.56 KB)
Tokuda, J., Song S. Sang- Eun, Fischer G., Iordachita I., Seifabadi R., Cho N. Bongjoon, et al. (2012).  Preclinical evaluation of an MRI-compatible pneumatic robot for angulated needle placement in transperineal prostate interventions. International Journal of Computer Assisted Radiology and Surgery (IJCARS). PDF icon CARS2012_BRP_Tokuda_full.pdf (1.08 MB)

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